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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs71559072 chr6:28089481 C/T BTN3A2 chr6:26365387-26378548:+ -0.84 -11.48 3.98E-27 Box Plot
THCA rs71559072 chr6:28089481 C/T RNF5P1 chr8:38458179-38458718:- 0.75 6.44 2.91E-10 Box Plot
THCA rs71559072 chr6:28089481 C/T ZFP57 chr6:29640169-29648887:- 0.98 9.08 2.94E-18 Box Plot
THCA rs71559082 chr6:28372192 C/T ZFP57 chr6:29640169-29648887:- 0.44 6.77 3.72E-11 Box Plot
THCA rs71563136 chr7:66230053 A/G CCT6P1 chr7:65216129-65228341:+ 0.43 6.54 1.54E-10 Box Plot
THCA rs7158709 chr14:39954583 A/T LOC647288 chr13:75811890-75814517:- -0.44 -7.16 3.1E-12 Box Plot
THCA rs71590644 chr5:43645710 T/C UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs71590645 chr5:43645744 T/A UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs7159539 chr14:66800426 A/C ATP6V1D chr14:67761088-67826982:- 0.43 7.51 2.92E-13 Box Plot
THCA rs71601339 chr5:176544496 A/G LOC388955 chr2:63849182-63850159:- -0.92 -24.06 2.04E-84 Box Plot
THCA rs71601343 chr5:176632107 G/A LOC388955 chr2:63849182-63850159:- -0.93 -24.35 9.63E-86 Box Plot
THCA rs71601344 chr5:176633493 G/A LOC388955 chr2:63849182-63850159:- -0.93 -24.35 9.63E-86 Box Plot
THCA rs7160664 chr14:39903074 T/A LOC647288 chr13:75811890-75814517:- 0.5 10.45 3.78E-23 Box Plot
THCA rs71612314 chr5:45996856 G/GT LOC647121 chr1:121260910-121313686:+ 0.37 7.8 4.04E-14 Box Plot
THCA rs7161403 chr14:39898349 A/C LOC647288 chr13:75811890-75814517:- -0.38 -7.59 1.65E-13 Box Plot